Index

A

accretionEDot() (in module diskpy.ICgen.AddBinary) add (class in diskpy.ICgen.ICgen) add_dust_sim() (in module diskpy.disk)

arraylistcat() (in module diskpy.clumps.simclumps) as_simarray() (in module diskpy.utils) assignOrbElems() (diskpy.ICgen.binary.Binary method) aToP() (in module diskpy.ICgen.AddBinary)

B

bin2d() (in module diskpy.pdmath) bin2dsum() (in module diskpy.pdmath) Binary (class in diskpy.ICgen.binary)

binaryPrecession() (in module diskpy.ICgen.AddBinary) binned_mean() (in module diskpy.pdmath) blank_clump() (in module diskpy.clumps.clumpfinding), [1] build_clumps() (in module diskpy.clumps.clumpfinding), [1]

C

calc_LB_resonance() (in module diskpy.ICgen.binaryUtils) calc_rho() (in module diskpy.ICgen.rhosolver) calcArgPeri() (in module diskpy.ICgen.AddBinary) calcCircularFrequency() (in module diskpy.ICgen.AddBinary) calcCOM() (in module diskpy.ICgen.AddBinary) calcCoMVsRadius() (in module diskpy.ICgen.binaryUtils) calcCriticalRadius() (in module diskpy.ICgen.AddBinary) calcDeDt() (in module diskpy.ICgen.binaryUtils) calcDiskRadialBins() (in module diskpy.ICgen.binaryUtils) calcEcc() (in module diskpy.ICgen.AddBinary) calcEccentricAnomaly() (in module diskpy.ICgen.AddBinary) calcEccVector() (in module diskpy.ICgen.AddBinary) calcInc() (in module diskpy.ICgen.AddBinary) calcLongOfAscNode() (in module diskpy.ICgen.AddBinary) calcMeanAnomaly() (in module diskpy.ICgen.AddBinary) calcMeanMotion() (in module diskpy.ICgen.AddBinary) calcNetTorque() (in module diskpy.ICgen.binaryUtils) calcOrbitalElements() (in module diskpy.ICgen.AddBinary) calcPoissonVsRadius() (in module diskpy.ICgen.binaryUtils) calcPositions() (in module diskpy.ICgen.AddBinary) calcQ() (in module diskpy.ICgen.binaryUtils) calcQVsRadius() (in module diskpy.ICgen.binaryUtils) calcRocheLobe() (in module diskpy.ICgen.AddBinary) calcSemi() (in module diskpy.ICgen.AddBinary) calcStableSigma() (in module diskpy.ICgen.binaryUtils) calcTrueAnomaly() (in module diskpy.ICgen.AddBinary)

calcV() (in module diskpy.ICgen.AddBinary) cdf() (in module diskpy.pdmath) cdf_inv() (in module diskpy.ICgen.rhosolver) cdf_inv_z() (in module diskpy.ICgen.rhosolver) centerdisk() (in module diskpy.disk) changa_command() (in module diskpy.pychanga) changa_run (class in diskpy.ICgen.ICgen_settings) changa_run() (in module diskpy.pychanga) changaFloatSearch() (in module diskpy.ICgen.binaryUtils) checkversion() (in module diskpy.ICgen.ICgen_utils) close() (diskpy.utils.logPrinter method) clump() (in module diskpy.clumps.simclumps) clump_im() (in module diskpy.clumps.clumpfinding), [1] clump_properties() (in module diskpy.clumps.clumpfinding), [1] clump_tracker() (in module diskpy.clumps.clumpfinding), [1] colorCodeArray() (in module diskpy.plot) colorCodedImage() (in module diskpy.plot) compute_E() (in module diskpy.ICgen.AddBinary) compute_L() (in module diskpy.ICgen.AddBinary) computeCartesian() (diskpy.ICgen.binary.Binary method) computeCOM() (in module diskpy.ICgen.binaryUtils) computeLenAx() (in module diskpy.ICgen.AddBinary) computeOrbElems() (diskpy.ICgen.binary.Binary method) computeVelocityCOM() (in module diskpy.ICgen.binaryUtils) configparser() (in module diskpy.utils) configsave() (in module diskpy.utils) copy() (diskpy.ICgen.make_sigma.sigma_gen method)

D

dA() (in module diskpy.pdmath) deepreload() (in module diskpy.utils) default_settings() (in module diskpy.ICgen.ICgen_settings) delistify() (diskpy.ICgen.ICgen_utils.larray method) (in module diskpy.ICgen.ICgen_utils) dI() (in module diskpy.ICgen.vertical_solver) digitize_threshold() (in module diskpy.pdmath) diskAverage() (in module diskpy.ICgen.binaryUtils) diskPrecession() (in module diskpy.ICgen.binaryUtils) diskpy (module) diskpy.clumps (module) diskpy.clumps.clumpfinding (module), [1] diskpy.clumps.simclumps (module) diskpy.disk (module) diskpy.docconf (module) diskpy.global_settings (module) diskpy.ICgen (module) diskpy.ICgen.AddBinary (module) diskpy.ICgen.binary (module) diskpy.ICgen.binaryUtils (module) diskpy.ICgen.calc_temp (module) diskpy.ICgen.calc_velocity (module)

diskpy.ICgen.ICgen (module) diskpy.ICgen.ICgen_settings (module) diskpy.ICgen.ICgen_utils (module) diskpy.ICgen.iterativesolver (module) diskpy.ICgen.make_sigma (module) diskpy.ICgen.make_snapshot (module) diskpy.ICgen.make_snapshotBinary (module) diskpy.ICgen.make_snapshotSType (module) diskpy.ICgen.make_snapshotSTypeSupplied (module) diskpy.ICgen.pos_class (module) diskpy.ICgen.rhosolver (module) diskpy.ICgen.sigma_profile (module) diskpy.ICgen.sigprofiles (module) diskpy.ICgen.sigprofiles.powerlaw (module) diskpy.ICgen.vertical_solver (module) diskpy.pdmath (module) diskpy.plot (module) diskpy.pychanga (module) diskpy.pychanga.hyak (module) diskpy.pychanga.mox (module) diskpy.utils (module) dotProduct() (in module diskpy.ICgen.AddBinary) dynamic_settings() (diskpy.global_settings.settings method)

E

est_eps() (in module diskpy.ICgen.ICgen_utils) est_time_step() (in module diskpy.pychanga) estHeight() (in module diskpy.ICgen.vertical_solver)

estHeight2() (in module diskpy.ICgen.iterativesolver) exists() (in module diskpy.clumps.simclumps) extrap1d() (in module diskpy.pdmath)

F

filenames (class in diskpy.ICgen.ICgen_settings) find_clumps() (in module diskpy.clumps.clumpfinding), [1] find_crit_radius() (in module diskpy.ICgen.binaryUtils) findCBResonances() (in module diskpy.ICgen.binaryUtils)

findfiles() (in module diskpy.utils) fit() (diskpy.ICgen.iterativesolver.IterativeSolver method) (diskpy.ICgen.vertical_solver.vertical_solver method) fitrobust() (diskpy.ICgen.vertical_solver.vertical_solver method) forcedEccentricity() (in module diskpy.ICgen.binaryUtils)

G

gaussian_ring() (in module diskpy.ICgen.sigma_profile) generate() (diskpy.ICgen.IC method) (diskpy.ICgen.ICgen.IC method) generateICs() (diskpy.ICgen.binary.Binary method)

get_fnames() (in module diskpy.pychanga) get_module_names() (in module diskpy.utils) get_units() (in module diskpy.utils) getpar() (in module diskpy.pychanga) gridplot() (in module diskpy.plot)

H

h_est() (in module diskpy.disk) heatmap() (in module diskpy.plot)

height() (in module diskpy.disk) heightProfile() (in module diskpy.ICgen.iterativesolver)

I

IC (class in diskpy.ICgen) (class in diskpy.ICgen.ICgen) init_director() (in module diskpy.ICgen.make_snapshot) init_param() (in module diskpy.ICgen.make_snapshot)

init_snapshot() (in module diskpy.ICgen.make_snapshot) initializeBinary() (in module diskpy.ICgen.AddBinary) interp1dunits() (in module diskpy.pdmath) iterate() (diskpy.ICgen.iterativesolver.IterativeSolver method) IterativeSolver (class in diskpy.ICgen.iterativesolver)

K

kappa() (in module diskpy.disk) kepler_pos() (in module diskpy.pdmath) keplerToCartesian() (in module diskpy.ICgen.AddBinary)

keys() (diskpy.clumps.simclumps.sim method) (diskpy.clumps.simclumps.simgroup method) kindSettingsBase (class in diskpy.ICgen.ICgen_settings)

L

larray (class in diskpy.ICgen.ICgen_utils) len2() (in module diskpy.clumps.simclumps) lineanimate() (in module diskpy.plot) linearMomentumEffects() (in module diskpy.ICgen.binaryUtils) link2() (in module diskpy.clumps.clumpfinding), [1] listify() (in module diskpy.ICgen.ICgen_utils) load() (diskpy.ICgen.ICgen_settings.settings method) (diskpy.ICgen.rhosolver method) (diskpy.ICgen.rhosolver.rhosolver method) (in module diskpy.ICgen) (in module diskpy.ICgen.ICgen)

load_acc() (in module diskpy.pychanga) loader() (diskpy.global_settings.settings class method) loadhalos() (in module diskpy.clumps) loadrho() (in module diskpy.ICgen) (in module diskpy.ICgen.rhosolver) logparser() (in module diskpy.utils) logPrinter (class in diskpy.utils)

M

make_binary() (in module diskpy.ICgen.make_snapshot) make_director() (in module diskpy.pychanga) make_param() (in module diskpy.pychanga) make_profile() (in module diskpy.ICgen.sigma_profile)

maker (class in diskpy.ICgen.ICgen) match_units() (in module diskpy.utils) meshinterp() (in module diskpy.pdmath) MQWS() (in module diskpy.ICgen.sigma_profile) multilink() (in module diskpy.clumps.clumpfinding), [1]

N

nClumps() (diskpy.clumps.simclumps.sim method) (diskpy.clumps.simclumps.simgroup method) newClump() (in module diskpy.clumps.simclumps) newSim() (in module diskpy.clumps.simclumps)

newSimgroup() (in module diskpy.clumps.simclumps) normalizeArray() (in module diskpy.plot) nsim() (diskpy.clumps.simclumps.simgroup method) nt() (diskpy.clumps.simclumps.sim method)

O

orbElemsVsRadius() (in module diskpy.ICgen.binaryUtils)

P

pbverbosity() (in module diskpy.utils) pClump_properties() (in module diskpy.clumps.clumpfinding), [1] pFind_clumps() (in module diskpy.clumps.clumpfinding), [1] physical (class in diskpy.ICgen.ICgen_settings) pickle_import() (in module diskpy.ICgen.ICgen_utils) pLink2() (in module diskpy.clumps.clumpfinding), [1] pos (class in diskpy.ICgen.pos_class) pos_gen (class in diskpy.ICgen.ICgen_settings) pos_gen() (diskpy.ICgen.ICgen.maker method)

powerlaw() (in module diskpy.ICgen.sigma_profile) (in module diskpy.ICgen.sigprofiles.powerlaw) powerspectrum() (in module diskpy.disk) powerspectrum_t() (in module diskpy.disk) print_defaults() (diskpy.ICgen.ICgen_settings.kindSettingsBase method) (diskpy.ICgen.ICgen_settings.settingsBase method) print_settings() (in module diskpy.ICgen.ICgen_settings) pSpiralpower_t() (in module diskpy.disk) pToA() (in module diskpy.ICgen.AddBinary)

Q

Q() (in module diskpy.disk) Qeff() (in module diskpy.disk) (in module diskpy.ICgen.ICgen_utils)

Qest() (diskpy.ICgen.IC method) (diskpy.ICgen.ICgen.IC method) (in module diskpy.ICgen.ICgen)

R

read_rung_dist() (in module diskpy.pychanga) reduceToPhysical() (in module diskpy.ICgen.AddBinary) repr_defaults() (in module diskpy.ICgen.ICgen_settings) repr_settings() (in module diskpy.ICgen.ICgen_settings) reshapeData() (diskpy.ICgen.binary.Binary method) residual() (diskpy.ICgen.vertical_solver.vertical_solver method) resolvedbins() (in module diskpy.pdmath) restore_defaults() (diskpy.global_settings.settings method)

rho() (diskpy.ICgen.ICgen.add method) rho0() (diskpy.ICgen.iterativesolver.IterativeSolver method) (in module diskpy.ICgen.vertical_solver) rho0_est() (in module diskpy.disk) rho_calc (class in diskpy.ICgen.ICgen_settings) rho_gen() (diskpy.ICgen.ICgen.maker method) rhointerp() (in module diskpy.ICgen.rhosolver) rhosolver (class in diskpy.ICgen) (class in diskpy.ICgen.rhosolver)

S

save() (diskpy.global_settings.settings method) (diskpy.ICgen.ICgen_settings.settings method) (in module diskpy.ICgen.ICgen) sbatch_script() (in module diskpy.pychanga.mox) set_units() (in module diskpy.utils) setDustfrac() (in module diskpy.disk) settings (class in diskpy.global_settings) (class in diskpy.ICgen.ICgen_settings) settingsBase (class in diskpy.ICgen.ICgen_settings) setup() (in module diskpy.ICgen.vertical_solver) setup_interior() (diskpy.ICgen.calc_temp.T method) setup_param() (in module diskpy.pychanga) setup_r_bins() (in module diskpy.ICgen.rhosolver) setup_sinks() (in module diskpy.ICgen.make_snapshot) setup_units() (in module diskpy.pychanga) setupbins() (in module diskpy.pdmath) sigma (class in diskpy.ICgen.ICgen_settings) sigma() (in module diskpy.disk) sigma_gen (class in diskpy.ICgen.make_sigma) sigma_gen() (diskpy.ICgen.ICgen.maker method)

sigmacylindrical() (in module diskpy.disk) sigmafft() (in module diskpy.disk) sim (class in diskpy.clumps.simclumps) simgroup (class in diskpy.clumps.simclumps) similarity() (in module diskpy.ICgen.iterativesolver) sink_radius() (in module diskpy.ICgen.make_snapshot) smoothstep() (in module diskpy.pdmath) snapshot (class in diskpy.ICgen.ICgen_settings) snapshot_defaults() (in module diskpy.disk) snapshot_gen() (diskpy.ICgen.ICgen.maker method) (in module diskpy.ICgen.make_snapshot) (in module diskpy.ICgen.make_snapshotBinary) (in module diskpy.ICgen.make_snapshotSType) (in module diskpy.ICgen.make_snapshotSTypeSupplied) snapshot_time() (in module diskpy.pychanga) solve() (diskpy.ICgen.rhosolver method) (diskpy.ICgen.rhosolver.rhosolver method) spiralpower() (in module diskpy.disk) spiralpower_t() (in module diskpy.disk) str2num() (in module diskpy.utils) strip_units() (in module diskpy.utils)

T

T (class in diskpy.ICgen.calc_temp) T_adiabatic() (diskpy.ICgen.calc_temp.T method)

T_nocut() (diskpy.ICgen.calc_temp.T method) torqueVsRadius() (in module diskpy.ICgen.binaryUtils) trueToMean() (in module diskpy.ICgen.AddBinary)

U

units_from_param() (in module diskpy.pychanga) (in module diskpy.utils)

V

v_xy() (in module diskpy.ICgen.calc_velocity)

vertical_solver (class in diskpy.ICgen.vertical_solver) viscous() (in module diskpy.ICgen.sigma_profile)

W

walltime() (in module diskpy.pychanga) waterfall() (in module diskpy.plot)

weighted_avg_and_std() (in module diskpy.pdmath) which() (in module diskpy.utils)